Research ACCESS
Expanding the Capacity for
Research & Innovation
 
March 12, 2008
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Current and archived issues are now searchable by keyword from the Research ACCESS index page.

Volume 4 Issue 8

· Facilities Profile: Computational Biology Laboratory
· Direct Costs Part I: Defining Direct Costs
· Staff Profile: Rick Taupier
· Campus Initiates Support for REUs
· Funding Opportunities
· Deadlines to Watch
· Announcements
· CVIP News
· Research Trends
· Events
· OGCA Histogram
· New Faculty
· February Grants & Contracts Snapshot
Facilities Profile: Computational Biology Laboratory

CompBioLab Cluster Rack
Biology at the Speed of Light

In some respects, modern biology is information science. Four letters of the DNA-based genetic code, the twenty amino acids used to make proteins, and the billions of possible combinations add up to some pretty tricky math problems. Now, with the 304-core CompBio Compute Cluster maintained by the Computational Biology Laboratory, calculations that used to take weeks can be run in less than a day. This resource, available for fractional use by western Massachusetts academic or industry researchers working on problems in computational biology, promises to further our understanding of biology and help find cures for many diseases, such as Alzheimer's disease, Mad Cow disease, or Creutzfeld-Jacob disease. [read more]

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Direct Costs Part I: Defining Direct Costs

When researchers apply for a grant or contract there are two cost categories included in their budgets: direct and indirect costs. Last year, ACCESS explored  indirect costs. This month's article is the first in a three-part series on direct costs and focuses on the basics: how direct costs are defined and categorized, and how to use important resources to determine direct costs. Next month's article will provide advice on using direct costs in budget writing, including the importance of properly determining the appropriate base for calculating indirect costs, identifying common budget mistakes, and tactics for maximizing direct costs in a budget. The final article will review some special considerations in allocating direct costs, including handling additional compensation issues and dividing costs on interdisciplinary projects.

By understanding and taking advantage of the many nuances involved in determining direct costs, PIs can ensure that their proposals move through the review system with greater efficiency and ultimately increase the likelihood of approval. [Read More]

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Staff Profile: Rick Taupier

Rick Taupier

Helping UMass Amherst Researchers Think (and Act) Globally

Over the past twenty-five years, UMass Amherst has developed formal exchange and research agreements with over 100 universities and colleges in 36 different countries. Recognizing the importance of thinking globally when it comes to expanding the capacity for research and innovation at UMass Amherst, the Research Area in 2007 welcomed Rick Taupier into the newly-created position of Associate Director for International Research in RL&D. In this capacity, Taupier will work closely with faculty, staff, and students to promote strategic international priorities, facilitate the creation of programs and collaborations that embody those priorities, foster international relationships through which they can be achieved, and build institutional knowledge in international research collaboration. [read more]



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Campus Initiates Support for Research Experiences for Undergraduates

Opportunities for undergraduates at UMass Amherst to experience graduate and professional level research work during the summer months are rapidly expanding as departments, institutes, and centers across campus are recognizing the benefits of such opportunities - both for the campus and the students. In order to streamline the formation process for new Research Experiences for Undergraduates (REUs), and to provide advice and advocacy for existing REUs, the campus is launching a formal administrative support system for these programs. [Read More]

Funding Opportunities

Hood Foundation Child Health Research Grants
Deadline: March 25
Estimated Award Size: $150,000 ($75,000 per year over 2 years)

The Charles H. Hood Foundation has issued a request for proposals for its Child Health Research Grants.Proposed projects must have direct relevance to diminishing pediatric diseases. More information is available online. UMass Amherst researchers intending to apply should contact Susan Worgaftik (413-577-2956) for assistance.

UMass Amherst Research Leadership in Action
Deadline: May 1, 2008
Estimated Award Size: Up to $25,000

This program supports research leadership through funding highly visible events that have a profound, positive impact on the campus and its scholarly endeavors. Grants support results-oriented events that bring together researchers, scholars, and funders from other academic institutions, industry, government, and the public. Events must enhance the faculty's ability to develop sponsored activities, build tangible ties with external funding sources that expand collaborative opportunities and the knowledge base of the discipline, and raise the campus' profile as an institution driving the directions of scholarly activity on a national and international level. For more information, see the Research Leadership in Action website or contact RLA Program Administrator Karen Hayes (413-545-9586).

MRI-MRS Pilot Research Grants
Next Deadline:  May 1, 2008
Estimated Award Size: Up to $15,000
The Office of Research has budgeted $60,000- $80,000 in each of the next three years to be used as seed money to fund several UMass faculty-led, pilot research projects per year focused on magnetic resonance imaging techniques. Successful pilot projects (maximum $15,000) will describe a project designed to generate preliminary data for an existing federal or national-level funding initiative. For more information, an application and instructions please go to the
Pilot Grant website.

Mathematics & Science Partnership Education Grant
Deadline: May 5, 2008
Estimated Award Size: Up to $250,000 for up to 3 years

The Massachusetts Mathematics & Science Partnership Program (MMSP) has issued a request for proposals to support projects that improve student achievement in science, technology/engineering, and mathematics through intensive, high-quality professional development activities that focus on deepening teachers' content knowledge and improving standards-based practices. Priority will be given to partnerships that focus on middle school STEM, integrate professional development offerings with school or district STEM improvement initiatives, and include inquiry-based learning experiences that help teachers master content. An information session will be held on April 8 at the Hoagland-Pincus Conference Center in Shrewsbury, MA. To register, visit the DOE Conferences website; for more information about the grant, contact Statewide Science Assistance Specialist Lisa Tyrrell (781-338-3514).

NCIIA Grants
The National Collegiate Inventors & Innovators Alliance (NCIIA) seeks applicants for the following two funding opportunities. More information, including application materials, may be found online.

"Course and Program Grants"

Deadline: May 9, 2008
Estimated Award Size: $2,000 - $50,000

These grants are to improve existing curricular programs or build new programs in invention, innovation, and entrepreneurship. Course and Program grants support creative pedagogy that brings real-life applications into the classroom setting and beyond. 

"Advanced E-Team Grants"
Deadline: May 9, 2008
Estimated Award Size: $1,000 - $20,000

These grants support commercial outcomes by moving innovative products and technologies from the idea stage to prototype and helping collegiate innovators secure IP. Successful proposals will demonstrate an idea's technical feasibility, commercialization potential, and social value. 

Microsoft HealthVault Be Well Fund
Deadline: May 9, 2008
Estimated Award Size: Up to $500,000

Microsoft's HealthVault Be Well Fund provides targeted funding to colleges, universities, and health institutions for the research and development of online tools that improve health. Proposals are encouraged for applications in primary prevention, secondary prevention, acute care, juvenile disease management, women's health management, and community and social health. Proposals must use the Microsoft HealthVault platform, a free Web-based IT platform designed for health data management. More information is available online. Additional corporate funding opportunities may be found on the Corporate Funding page of the UMass Research area website.

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Deadlines to Watch
Announcements

UMass Releases Clean Energy Report
The UMass Clean Energy Working Group has released Clean Energy for the Commonwealth, Powered by the University of Massachusetts. The report establishes the context for the University's role in the Commonwealth's clean energy industries and initiatives, spotlights a number of current UMass clean energy research and teaching programs and activities, and makes recommendations for future action. The report is available in print, by contacting RL&D Associate Director Loren Walker (413-577-3725), or online (PDF).

Women in Science Summer Internship Program
Deadline: March 31
The Association for Women in Science (AWIS) Summer Internship Program welcomes applications for the 2008 summer session. The AWIS Internship Program is one of the premiere opportunities for young women in the fields of science, technology, engineering, and mathematics. In recent years, the program has focused on attracting outstanding female undergraduates who are members of groups currently under-represented in the STEM disciplines:  individuals of African American, Latino/Hispanic, Native American, and Pacific Islander descent. For more information, see the Program announcement (PDF) or visit the internship page of the AWIS website.

UMass Included in State's Life Sciences Plan
A 10-year, $1-billion plan to support the state's life sciences industry, including $200 million for the University system, was unveiled February 14 by House Speaker Salvatore DiMasi. The plan includes $95 million for a life sciences research center at the Amherst campus. In addition, the proposal creates a $40 million Mello Small Business Grant program, named in honor of Medical School researcher Dr. Craig Mello. Another $30 million is intended for graduate-level scholarships. The full text of the bill (House, No. 4539) is available online (PDF).

New Reports on the Creative Economy
The New England Foundation for the Arts has released a report, The Creative Economy: A New Definition (PDF), in which Massachusetts is shown to have a competitive advantage in both cultural workers and enterprise employment. The Commonwealth also fares strongly in a new Creative Industries report issued by Americans for the Arts.

Spring 2008 "Passport UMass" Newsletter Available
The latest edition of the Passport UMass newsletter, produced by the UMass International Relations Advisory Council, is now available online. The newsletter features important news, events, and profiles related to the international activities of UMass faculty, staff, researchers, and students.

Spring 2008 Environmental Lecture Series
The Environmental Institute announces the Spring 2008 Environmental Lecture Series: Emerging Technologies and the Environment. Series speakers will address the challenges and environmental applications of a range of emerging technologies including nanotechnology, wireless sensor networks, and genome science. The lectures, which are free and open to the public, take place at 3:30pm in the Cape Cod Lounge, Student Union Building UMass Amherst. For dates and speakers, visit the TEI websiteCo-sponsored by the Vice Provost for Research, Graduate School, and Colleges of Natural Resources and the Environment, Natural Sciences and Mathematics, Engineering, Social and Behavioral Sciences, and Public Health and Health Sciences.

Temporary student position available with Clean Energy group
A renewable energy assessment group is looking for a resourceful, self-directed individual to conduct analysis of various business, economic, and technology data. The ideal candidate will be working toward an undergraduate or graduate degree in business, economics, or engineering and have knowledge of database research methods, as well as strong analytical and problem solving skills, and the ability to conduct disciplined evaluation of online sources. A strong interest in clean/ renewable energy technology is preferred. Work will include conducting online/library searches for information, formulation of databases for analysis, and summary of results. Contact Zvi Rozen of Grayhead Associates for information or to apply.

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CVIP News

CVIP Patents Filed
Congratulations to the following UMass Amherst researchers, for whom CVIP filed patent applications for inventions in 2007.

E. Bryan Coughlin (Polymer Science) for "Cross-Linked Polycyclooctene"

Mark Tuominen and Andrei Ursache (Physics), and Thomas Russell (Polymer Science) for "Nanofabrication"

Thomas Russell and Mark Tuominen for "Nanocylinder Arrays"

L. Semprevivo (Veterinary and Animal Sciences) for "Lipoglycan Compositions and Methods of Treating Parasitic Infections"

S. Cumberledge (Biochemical and Molecular Biology) for "Secreted Frizzled Related Protein, SFRP, Fragments and Methods of Use Thereof"

Micah Adler (Computer Science) for "Probabilistic Packet Marking"

Israel Koren, C. Mani Krishna, and Csaba Andras Moritz (Electrical and Computer Engineering) for "Reducing Processor Energy Consumption Using Compile-Time Information"

Wayne Burleson (Electrical and Computer Engineering) for "Circuit for Differential Current Sensing with Reduced Static Power"

Joseph Jerry (Veterinary and Animal Sciences) for "Cloning Pigs Using Donor cells or Nuclei from Differentiated Cells (Somatic or Germ Cells) and Production of Pluripotent Porcine Cells by Nuclear Transplantation"

Thomas Boyle (Plant, Soil, and Insect Sciences) for "Cactaceae Plant Name 'Harmony'" and "Cactaceae Plant Named 'Elsie'"

CVIP Technology Development Award Winners
Two UMass Amherst researchers are among the winners of the 2007 CVIP Technology Development Awards. The CVIP Technology Development Fund was established by CVIP in the President's Office in 2004 to provide UMass researchers with supplemental funding to advance previously disclosed University technologies toward commercialization. The grant is intended to move technologies to the proof of concept stage or to allow the investigator to take other critical steps to make the technology attractive for licensing or other forms of commercialization. The UMass Amherst faculty who received Awards this year are Kevin Fu (Computer Science) for "Zero-Power Telemetry for Implantable Medical Devices" and George W. Huber (Chemical Engineering) for "Green Gasoline from Catalytic Fast Pyrolysis of Lignocellulosic Biomass".

"TechCast at UMass" Features Pioneer Valley Life Sciences Institute
CVIP has released the latest episode of "TechCast at UMass" - a podcast series featuring the breakthrough discoveries of UMass Amherst researchers and showcasing partnerships that create new commercial ventures. The current episode highlights the Pioneer Valley Life Sciences Institute, a partnership between UMass Amherst and the Baystate Medical Center. PVLSI Science Director and UMass Professor of Biology Dr. Larry Schwartz and PVLSI Executive Director Dr. Paul Friedmann discuss the Institute and its newest addition, the Center of Excellence in Apoptosis Research.

Research Trends

FY08 Federal Budget May Impact NSF Cost Sharing Requirements
In a recent report, the National Science Board recommends that the National Science Foundation resume requiring universities to share more of the costs of sponsored projects as a condition of receiving certain kinds of industry-oriented research centers. More on the report, and reaction to it, may be found in the Chronicle of Higher Education. This renewed emphasis on cost sharing may stem from the recent passage of the FY08 federal budget bill, which provides the NSF with $364 million less than it had requested. The FY08 budget for the DOE's Office of Science was likewise funded below its requested amount. The American Institute of Physics provides more information on the ramifications of the FY08 budget.
 

Events

March 13: Invention to Venture and Ignite Clean Energy (ICE) will hold a "bootcamp" introduction to the process and practice of technology entrepreneurship. Speakers will discuss topics such as idea validation, sales & marketing, intellectual property, and venture funding. To register, or for more details, visit the Bootcamp website or contact Kimberly Onsager (617-253-2971).

March 17: Massachusetts Life Sciences Center Chief of Staff Melissa Walsh and Mass Tech Collaborative staff director Beth Nicklas will hold a briefing on the MLSC's matching grants program at 1:00pm at the UMass Amherst Conte National Center for Polymer Research.

March 24: The Mass Tech Transfer Center co-sponsors the fourth Early-Stage Life Sciences Technology Conference to be held from 1:00pm to 7:00pm at Harvard Medical School. This year's conference includes a special session on the role foundations are playing in supporting life sciences technology transfer. For information on registration, or to submit a proposal for presentation, visit the Conference website or contact Julia Goldberg.

March 27: The UMass Amherst School of Public Health and Health Sciences presents the tenth annual SPHHS Research Day, featuring a student poster session, keynote speaker Dr. Harold W. Kohl III (University of Texas) on "Physical Activity and Public Health: The Future is Now", and presentation of Research Day Awards. Student poster session and featured seminar are open to the campus community as well as adjunct faculty, alumni, and the community at large. For more information, contact Pauline Hollister (413-545-2526).

March 28: 2008 INFORMS Speakers Series - Professor Eitan Bachmat (Ben Gurion University) will speak on "Airplane Boarding and Space-Time Geometry" at 11:00am in Isenberg Room 112.

April 8: The Massachusetts Water Resources Research Center and UMass Extension host the 5th Annual Conference on Water Resources, "Integrating Water Resources Management for a Secure Water Future", at the UMass Amherst Lincoln Campus Center. Keynote speaker EPA Deputy Regional Administrator Ira Leighton will address developments in stormwater policy and remediation. The Conference will feature tracks focused on water resources management and planning, stormwater management, climate change and water resources, and research to address impaired water resources. More information is available online.

April 10 - 11: The UMass 2008 Instructional Technology Conference, "The Scholarship of Teaching and Learning: Making IT Matter", will be held at the Holiday Inn in Boxborough, MA. Workshops will be held on April 10; the main conference on April 11 includes poster sessions, concurrent panels, and keynote speaker Chris Dede, Professor of Learning Technologies at Harvard University. More information, including online registration, is available from the conference website. Questions may be addressed to UMass Associate Vice President Mark Schlesinger (617-287-7102).

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OGCA Histogram

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New Faculty

This month Research ACCESS welcomes the following new faculty from the College of Natural Sciences and Mathematics. Click here for a full listing of these faculty and their research interests.

Julio Navarro, Astronomy

James Chambers and Nathan SchnarrChemistry

Matthais Bernet, Geosciences

Michael Lavine, Math & Stats

Laura Cadonati, Jennifer Ross, Christian Santangelo, and Egor Babaev, Physics

Gregory Grason, Polymer Science & Engineering

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February Grants & Contracts Snapshot

Each month ACCESS includes a selection of grants and contracts awarded to faculty from across campus to provide a sense of what's going on in research at UMass Amherst. These listings reflect only a small fraction of the total sponsored activity for any given month. Since this is just a snapshot in time and grant/contract terms vary, actual award totals may be higher than the amounts listed.

Lawrence L. Ambs
Mechanical and Industrial Engineering
Sponsor: National Grid Inc.
Title: MAEEP MA Energy Efficiency Partnership Industry Support
Total Award: $75,000 

Daniel L. Blanchard
Center for Educational Software Development
Sponsor: Internet2
Title: Internet2 Network Security Collaboration
Total Award: $29,038 

Edward J. Calabrese
Public Health
Sponsor: Air Force Office of Scientific Research
Title: Chemical/Radiation Hormesis Database, Evaluation of Hormetic Mechanisms & Their Biomedical and Risk Assessment Implications
Total Award: $299,371 

John F. Donoghue
Physics
Sponsor: National Science Foundation
Title: Elementary Particle, Nuclei and Relativity
Total Award: $320,000 

Neal R. Erickson
Astronomy
Sponsor: National Science Foundation
Title: A Redshift Search for the Large Millimeter Telescope
Total Award: $231,922 

Brian Kane
Natural Resources Conservation
Sponsor: MA Department of Conservation and Recreation
Title: DCR Urban & Community Forestry Performance Tracking System
Total Award: $25,000 

Dragoljub Beka Kosanovic
Mechanical and Industrial Engineering
Sponsor: US Department of Energy
Title: Industrial Assessment Center Program
Total Award: $40,000 

Andrew McCallum
Computer Science
Sponsor: University of Pennsylvania
Title: Situation Understanding Bot Through Language and Enivronment
Total Award: $113,949 

Andreas Muschinski
Electrical and Computer Engineering
Sponsor: Army Research Office
Title: Supplement to Investigation of Turbulence and Intermittency in the Convective Boundary Layer, Using a 915 MHz Volume Wind Profiler
Total Award: $62,325

Kathleen G. Rubin
Office of the Dean of the School of Engineering
Sponsor: The National GEM Consortium
Title: Graduate Degrees for Minorities in Engineering and Science
Total Award: $10,000

Paul R. Sievert
Natural Resources Conservation
Sponsor: MA Division of Fisheries and Wildlife
Title: Distribution and Abundance of Four-toed Salamanders: A Multi-scale Model of Habitat Preference
Total Award: $10,000

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