Sample Images Made with the
These PolyView-3D images use 1d66, in which the DNA-binding domain of the
Gal4 transcriptional regulatory protein is bound to DNA.
18 sits in the major groove of DNA, recognizing the DNA sequence
Chains are PyMol's default colors.
A:18 Blue Spacefilling and
D:2-4 Red, Sticks.
The molecule's initial orientation is rotated -90 degrees around Y.
The center is residue 34 in chain E. The scale is 200%.
The animations below use rocking
around the Y axis through 90 degrees in 2 degree steps,
with a 5/100 second delay.
Because the bigger animation is large (500 pixels) and smooth (90
images), it took 30 minutes for the Polyview-3D server to make
it. But even the smaller version (200 pixels, 90 images) took 15 minutes!